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BMCBI
2010
189views more  BMCBI 2010»
14 years 10 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
BMCBI
2006
144views more  BMCBI 2006»
14 years 10 months ago
Development and implementation of an algorithm for detection of protein complexes in large interaction networks
Background: After complete sequencing of a number of genomes the focus has now turned to proteomics. Advanced proteomics technologies such as two-hybrid assay, mass spectrometry e...
Md. Altaf-Ul-Amin, Yoko Shinbo, Kenji Mihara, Ken ...
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TMI
2002
248views more  TMI 2002»
14 years 9 months ago
Adaptive Elastic Segmentation of Brain MRI via Shape Model Guided Evolutionary Programming
This paper presents a fully automated segmentation method for medical images. The goal is to localize and parameterize a variety of types of structure in these images for subsequen...
Alain Pitiot, Arthur W. Toga, Paul M. Thompson
INFOCOM
2010
IEEE
14 years 8 months ago
Analyzing Nonblocking Switching Networks using Linear Programming (Duality)
Abstract—The main task in analyzing a switching network design (including circuit-, multirate-, and photonic-switching) is to determine the minimum number of some switching compo...
Hung Q. Ngo, Atri Rudra, Anh N. Le, Thanh-Nhan Ngu...
INFOCOM
2010
IEEE
14 years 8 months ago
On Channel-Discontinuity-Constraint Routing in Wireless Networks
Multi-channel wireless networks are increasingly being employed as infrastructure networks, e.g. in metro areas. Nodes in these networks frequently employ directional antennas to ...
Swaminathan Sankararaman, Alon Efrat, Srinivasan R...