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ALMOB
2008
131views more  ALMOB 2008»
14 years 10 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
JACM
2006
99views more  JACM 2006»
14 years 9 months ago
Finding a maximum likelihood tree is hard
Abstract. Maximum likelihood (ML) is an increasingly popular optimality criterion for selecting evolutionary trees [Felsenstein 1981]. Finding optimal ML trees appears to be a very...
Benny Chor, Tamir Tuller
BMCBI
2004
196views more  BMCBI 2004»
14 years 9 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
AMAI
2008
Springer
14 years 10 months ago
The giving tree: constructing trees for efficient offline and online multi-robot coverage
This paper discusses the problem of building efficient coverage paths for a team of robots. An efficient multi-robot coverage algorithm should result in a coverage path for every ...
Noa Agmon, Noam Hazon, Gal A. Kaminka
CIKM
2004
Springer
15 years 1 months ago
InfoAnalyzer: a computer-aided tool for building enterprise taxonomies
In this paper we study the problem of collecting training samples for building enterprise taxonomies. We develop a computer-aided tool named InfoAnalyzer, which can effectively as...
Li Zhang, Shixia Liu, Yue Pan, Liping Yang