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» A Multi-metric Similarity Based Analysis of Microarray Data
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ALMOB
2007
111views more  ALMOB 2007»
14 years 12 months ago
Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12
Motivation: Transcriptional regulatory network (TRN) discovery from one method (e.g. microarray analysis, gene ontology, phylogenic similarity) does not seem feasible due to lack ...
Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa E...
BMCBI
2004
131views more  BMCBI 2004»
14 years 11 months ago
Alternative mapping of probes to genes for Affymetrix chips
Background: Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the...
Laurent Gautier, Morten Møller, Lennart Fri...
SISAP
2010
IEEE
259views Data Mining» more  SISAP 2010»
14 years 9 months ago
kNN based image classification relying on local feature similarity
In this paper, we propose a novel image classification approach, derived from the kNN classification strategy, that is particularly suited to be used when classifying images descr...
Giuseppe Amato, Fabrizio Falchi
BMCBI
2007
112views more  BMCBI 2007»
14 years 11 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
BMCBI
2008
117views more  BMCBI 2008»
14 years 12 months ago
New resampling method for evaluating stability of clusters
Background: Hierarchical clustering is a widely applied tool in the analysis of microarray gene expression data. The assessment of cluster stability is a major challenge in cluste...
Irina Gana Dresen, Tanja Boes, Johannes Hüsin...