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» A New Approach to Protein Identification
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BMCBI
2008
173views more  BMCBI 2008»
15 years 2 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
ESWA
2006
161views more  ESWA 2006»
15 years 1 months ago
Automated trend analysis of proteomics data using an intelligent data mining architecture
Proteomics is a field dedicated to the analysis and identification of proteins within an organism. Within proteomics, two-dimensional electrophoresis (2-DE) is currently unrivalle...
James Malone, Kenneth McGarry, Chris Bowerman
BMCBI
2008
141views more  BMCBI 2008»
15 years 2 months ago
Discovering functional interaction patterns in protein-protein interaction networks
Background: In recent years, a considerable amount of research effort has been directed to the analysis of biological networks with the availability of genome-scale networks of ge...
Mehmet E. Turanalp, Tolga Can
BMCBI
2011
14 years 9 months ago
NClassG+: A classifier for non-classically secreted Gram-positive bacterial proteins
Background: Most predictive methods currently available for the identification of protein secretion mechanisms have focused on classically secreted proteins. In fact, only two met...
Daniel Restrepo-Montoya, Camilo Pino, Luis F. Ni&n...
JCB
2000
107views more  JCB 2000»
15 years 1 months ago
A Discriminative Framework for Detecting Remote Protein Homologies
A new method for detecting remote protein homologies is introduced and shown to perform well in classifying protein domains by SCOP superfamily. The method is a variant of support...
Tommi Jaakkola, Mark Diekhans, David Haussler