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HAPTICS
2007
IEEE
15 years 4 months ago
Time-Based Haptic Analysis of Protein Dynamics
We present a new approach for evaluating a protein’s simulated trajectory via time-based haptic feedback. Molecular-scale trajectories are highly dynamic and thus pose new deman...
Katrin Bidmon, Guido Reina, Fabian Bös, J&uum...
CSB
2005
IEEE
117views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Protein Structure Prediction Using Physical-Based Global Optimization and Knowledge-Guided Fragment Packing
We describe a new method to predict the tertiary structure of new-fold proteins. Our two-phase approach combines the knowledge-based fragmentpacking with the minimization of a phy...
Jinhui Ding, Elizabeth Eskow, Nelson L. Max, Silvi...
BIOINFORMATICS
2007
161views more  BIOINFORMATICS 2007»
14 years 10 months ago
Functional evaluation of domain-domain interactions and human protein interaction networks
: Large amounts of protein and domain interaction data are being produced by experimental high-throughput techniques and computational approaches. To gain insight into the value of...
Andreas Schlicker, Carola Huthmacher, Fidel Ram&ia...
BMCBI
2008
133views more  BMCBI 2008»
14 years 10 months ago
LocateP: Genome-scale subcellular-location predictor for bacterial proteins
Background: In the past decades, various protein subcellular-location (SCL) predictors have been developed. Most of these predictors, like TMHMM 2.0, SignalP 3.0, PrediSi and Phob...
Miaomiao Zhou, Jos Boekhorst, Christof Francke, Ro...
BMCBI
2008
106views more  BMCBI 2008»
14 years 10 months ago
Identification of hot-spot residues in protein-protein interactions by computational docking
Background: The study of protein-protein interactions is becoming increasingly important for biotechnological and therapeutic reasons. We can define two major areas therein: the s...
Solène Grosdidier, Juan Fernández-Re...