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» A New Approach to Protein Structure Mining and Alignment
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KDD
2002
ACM
144views Data Mining» more  KDD 2002»
15 years 10 months ago
Efficiently mining frequent trees in a forest
Mining frequent trees is very useful in domains like bioinformatics, web mining, mining semi-structured data, and so on. We formulate the problem of mining (embedded) subtrees in ...
Mohammed Javeed Zaki
BMCBI
2010
190views more  BMCBI 2010»
14 years 10 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
ICNSC
2008
IEEE
15 years 4 months ago
Multiple Sequence Alignment Based on Genetic Algorithms with Reserve Selection
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...
Yang Chen, Jinglu Hu, Kotaro Hirasawa, Songnian Yu
BMCBI
2010
163views more  BMCBI 2010»
14 years 10 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
ISBI
2009
IEEE
15 years 4 months ago
A Data-Driven Approach to Discovering Common Brain Anatomy
An atlas defines a common coordinate system to enable the comparison of data from different subjects. Key in the development of a brain atlas are the identification of a common ...
Neil I. Weisenfeld, Simon K. Warfield