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ERCIMDL
2005
Springer
114views Education» more  ERCIMDL 2005»
13 years 11 months ago
Compressing Dynamic Text Collections via Phrase-Based Coding
We present a new statistical compression method, which we call Phrase Based Dense Code (PBDC), aimed at compressing large digital libraries. PBDC compresses the text collection to ...
Nieves R. Brisaboa, Antonio Fariña, Gonzalo...
BMVC
1998
13 years 7 months ago
Choosing an Optimal Neural Network Size to aid a Search Through a Large Image Database
In this paper a fast method of selecting a neural network architecture for pattern recognition tasks is presented. We demonstrate that our proposed method of selecting both input ...
Kieron Messer, Josef Kittler
BMCBI
2011
12 years 9 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
CSB
2004
IEEE
142views Bioinformatics» more  CSB 2004»
13 years 10 months ago
FastR: Fast Database Search Tool for Non-Coding RNA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology. Yet, many more remain undiscovered. It has been hypothesized that there is ...
Vineet Bafna, Shaojie Zhang
BMCBI
2010
121views more  BMCBI 2010»
13 years 3 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...