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» A New Indexing Method for Approximate String Matching
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DEXA
2007
Springer
150views Database» more  DEXA 2007»
15 years 3 months ago
Sequence Alignment as a Database Technology Challenge
Abstract. Sequence alignment is an important task for molecular biologists. Because alignment basically deals with approximate string matching on large biological sequence collecti...
Hans Philippi
SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
15 years 1 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
RECOMB
2002
Springer
15 years 9 months ago
Provably sensitive Indexing strategies for biosequence similarity search
The field of algorithms for pairwisc biosequence similarity search is dominated by heuristic methods of high efficiency but uncertain sensitivity. One reason that more formal stri...
Jeremy Buhler
JCB
2008
122views more  JCB 2008»
14 years 9 months ago
Space Efficient Computation of Rare Maximal Exact Matches between Multiple Sequences
In this article, we propose a new method for computing rare maximal exact matches between multiple sequences. A rare match between k sequences S1; : : :; Sk is a string that occur...
Enno Ohlebusch, Stefan Kurtz
CORR
2004
Springer
136views Education» more  CORR 2004»
14 years 9 months ago
Analysis and Visualization of Index Words from Audio Transcripts of Instructional Videos
We introduce new techniques for extracting, analyzing, and visualizing textual contents from instructional videos of low production quality. Using Automatic Speech Recognition, ap...
Alexander Haubold, John R. Kender