As parallel machines become part of the mainstream computing environment, compilers will need to apply synchronization optimizations to deliver e cient parallel software. This pap...
Data parallel programs are sensitive to the distribution of data across processor nodes. We formulate the reduction of inter-node communication as an optimization on a colored gra...
Molecular Dynamics applications enhance our understanding of biological phenomena through bio-molecular simulations. Large-scale parallelization of MD simulations is challenging b...
Many new Partitioned Global Address Space (PGAS) programming languages have recently emerged and are becoming ubiquitously available on nearly all modern parallel architectures. PG...
Mohamed Bakhouya, Jaafar Gaber, Tarek A. El-Ghazaw...
Background: Recent advances in global genomic profiling methodologies have enabled multidimensional characterization of biological systems. Complete analysis of these genomic prof...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Raym...