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» A New Problem in String Searching
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69
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IJCAI
2003
14 years 11 months ago
Comparing Best-First Search and Dynamic Programming for Optimal Multiple Sequence Alignment
Sequence alignment is an important problem in computational biology. We compare two different approaches to the problem of optimally aligning two or more character strings: bounde...
Heath Hohwald, Ignacio Thayer, Richard E. Korf
FCCM
2011
IEEE
311views VLSI» more  FCCM 2011»
14 years 1 months ago
String Matching in Hardware Using the FM-Index
—String matching is a ubiquitous problem that arises in a wide range of applications in computing, e.g., packet routing, intrusion detection, web querying, and genome analysis. D...
Edward Fernandez, Walid Najjar, Stefano Lonardi
78
Voted
JUCS
2010
130views more  JUCS 2010»
14 years 8 months ago
On the Linear Number of Matching Substrings
Abstract: We study the number of matching substrings in the pattern matching problem. In general, there can be a quadratic number of matching substrings in the size of a given text...
Yo-Sub Han
SODA
2010
ACM
213views Algorithms» more  SODA 2010»
15 years 7 months ago
Regular Expression Matching with Multi-Strings
Regular expression matching is a key task (and often computational bottleneck) in a variety of software tools and applications. For instance, the standard grep and sed utilities, ...
Philip Bille, Mikkel Thorup
ICDAR
2011
IEEE
13 years 9 months ago
Word Retrieval in Historical Document Using Character-Primitives
Word searching and indexing in historical document collections is a challenging problem because, characters in these documents are often touching or broken due to degradation/agei...
Partha Pratim Roy, Jean-Yves Ramel, Nicolas Ragot