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ICPP
2006
IEEE
15 years 11 months ago
A Parallel, Out-of-Core Algorithm for RNA Secondary Structure Prediction
RNA pseudoknot prediction is an algorithm for RNA sequence search and alignment. An important building block towards pseudoknot prediction is RNA secondary structure prediction. T...
Wenduo Zhou, David K. Lowenthal
IPCCC
2006
IEEE
15 years 11 months ago
SHARP: a new real-time scheduling algorithm to improve security of parallel applications on heterogeneous clusters
This paper addresses the problem of improving quality of security for real-time parallel applications on heterogeneous clusters. We propose a new security- and heterogeneity-drive...
Tao Xie 0004, Xiao Qin, Mais Nijim
HIPC
2004
Springer
15 years 10 months ago
A Parallel State Assignment Algorithm for Finite State Machines
This paper summarizes the design and implementation of a parallel algorithm for state assignment of large Finite State Machines (FSMs). High performance CAD tools are necessary to...
David A. Bader, Kamesh Madduri
ACISICIS
2009
IEEE
15 years 8 months ago
A Parallel Algorithm for Computer Simulation of Electrocardiogram Based on MPI
—This paper presents a parallel algorithm for computer simulation of Electrocardiogram (ECG) based on a 3-dimensional (3D) whole-heart model. The computer heart model includes ap...
Wenfeng Shen, Weijia Lu, Daming Wei, Weimin Xu, Xi...
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MASCOTS
2001
15 years 6 months ago
Time-Parallel Algorithms for Simulation of Multiple Access Protocols
We present time-parallel algorithms for parallel simulation of multiple access protocols for medium access
Kevin G. Jones, Samir Ranjan Das