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ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
15 years 6 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
148
Voted
IJHPCA
2010
88views more  IJHPCA 2010»
15 years 5 months ago
Madre: the Memory-Aware Data Redistribution Engine
We report on the development of a new computational framework for efficiently carrying out parallel data redistribution in a limited memory environment. This new library, MADRE (T...
Stephen F. Siegel, Andrew R. Siegel
TVCG
2010
141views more  TVCG 2010»
15 years 4 months ago
Fast Construction of k-Nearest Neighbor Graphs for Point Clouds
—We present a parallel algorithm for k-nearest neighbor graph construction that uses Morton ordering. Experiments show that our approach has the following advantages over existin...
Michael Connor, Piyush Kumar
CCR
2010
151views more  CCR 2010»
15 years 3 months ago
iNFAnt: NFA pattern matching on GPGPU devices
This paper presents iNFAnt, a parallel engine for regular expression pattern matching. In contrast with traditional approaches, iNFAnt adopts non-deterministic automata, allowing ...
Niccolo Cascarano, Pierluigi Rolando, Fulvio Risso...
IPPS
2002
IEEE
15 years 11 months ago
Distribution Sweeping on Clustered Machines with Hierarchical Memories
This paper investigates the design of parallel algorithmic strategies that address the efficient use of both, memory hierarchies within each processor and a multilevel clustered ...
Frank K. H. A. Dehne, Stefano Mardegan, Andrea Pie...