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ICPPW
2009
IEEE
14 years 7 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
PLDI
2012
ACM
13 years 6 days ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
TKDE
2002
148views more  TKDE 2002»
14 years 9 months ago
Parallel Star Join + DataIndexes: Efficient Query Processing in Data Warehouses and OLAP
On-Line Analytical Processing (OLAP) refers to the technologies that allow users to efficiently retrieve data from the data warehouse for decision-support purposes. Data warehouses...
Anindya Datta, Debra E. VanderMeer, Krithi Ramamri...
DAGSTUHL
2007
14 years 11 months ago
Parallelism through Digital Circuit Design
Abstract. Two ways to exploit chips with a very large number of transistors are multicore processors and programmable logic chips. Some data parallel algorithms can be executed eï¬...
John O'Donnell
PLDI
1993
ACM
15 years 1 months ago
Global Optimizations for Parallelism and Locality on Scalable Parallel Machines
Data locality is critical to achievinghigh performance on large-scale parallel machines. Non-local data accesses result in communication that can greatly impact performance. Thus ...
Jennifer-Ann M. Anderson, Monica S. Lam