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» A Parallel Algorithm for Gene Expressing Data Biclustering
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104
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BMCBI
2006
120views more  BMCBI 2006»
15 years 18 days ago
A factor analysis model for functional genomics
Background: Expression array data are used to predict biological functions of uncharacterized genes by comparing their expression profiles to those of characterized genes. While b...
Rafal Kustra, Romy Shioda, Mu Zhu
BMCBI
2008
124views more  BMCBI 2008»
15 years 20 days ago
A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays
Background: Microarray pre-processing usually consists of normalization and summarization. Normalization aims to remove non-biological variations across different arrays. The norm...
Huanying Ge, Chao Cheng, Lei M. Li
87
Voted
WCRE
2002
IEEE
15 years 5 months ago
Exposing Data-Level Parallelism in Sequential Image Processing Algorithms
As new computer architectures are developed to exploit large-scale data-level parallelism, techniques are needed to retarget legacy sequential code to these platforms. Sequential ...
Lewis B. Baumstark Jr., Linda M. Wills
109
Voted
BMCBI
2004
113views more  BMCBI 2004»
15 years 12 days ago
Influence of microarrays experiments missing values on the stability of gene groups by hierarchical clustering
Background: Microarray technologies produced large amount of data. The hierarchical clustering is commonly used to identify clusters of co-expressed genes. However, microarray dat...
Alexandre G. de Brevern, Serge A. Hazout, Alain Ma...
112
Voted
ICDM
2002
IEEE
158views Data Mining» more  ICDM 2002»
15 years 5 months ago
Adaptive dimension reduction for clustering high dimensional data
It is well-known that for high dimensional data clustering, standard algorithms such as EM and the K-means are often trapped in local minimum. Many initialization methods were pro...
Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha, Horst...