During the last decade, several clustering and association rule mining techniques have been applied to highlight groups of coregulated genes in gene expression data. Nowadays, inte...
In this paper, block diagonal linear discriminant analysis (BDLDA) is improved and applied to gene expression data. BDLDA is a classification tool with embedded feature selection...
Lingyan Sheng, Roger Pique-Regi, Shahab Asgharzade...
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
The nested data-parallel programming model supports the design and implementation of irregular parallel algorithms. This paper describes work in progress to incorporate nested data...
Brian Blount, Siddhartha Chatterjee, Michael Phili...
Background: Affymetrix GeneChips are a popular platform for performing whole-genome experiments on the transcriptome. There are a range of different calibration steps, and users a...
Andrew P. Harrison, Caroline E. Johnston, Christin...