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» A Parallel Algorithm for Gene Expressing Data Biclustering
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133
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HIPC
2009
Springer
14 years 10 months ago
Highly scalable algorithm for distributed real-time text indexing
Stream computing research is moving from terascale to petascale levels. It aims to rapidly analyze data as it streams in from many sources and make decisions with high speed and a...
Ankur Narang, Vikas Agarwal, Monu Kedia, Vijay K. ...
89
Voted
GECCO
2004
Springer
138views Optimization» more  GECCO 2004»
15 years 5 months ago
Comparing Genetic Programming and Evolution Strategies on Inferring Gene Regulatory Networks
Abstract. In recent years several strategies for inferring gene regulatory networks from observed time series data of gene expression have been suggested based on Evolutionary Algo...
Felix Streichert, Hannes Planatscher, Christian Sp...
111
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KDD
2005
ACM
137views Data Mining» more  KDD 2005»
16 years 28 days ago
Pattern-based similarity search for microarray data
One fundamental task in near-neighbor search as well as other similarity matching efforts is to find a distance function that can efficiently quantify the similarity between two o...
Haixun Wang, Jian Pei, Philip S. Yu
PLDI
2011
ACM
14 years 3 months ago
The tao of parallelism in algorithms
For more than thirty years, the parallel programming community has used the dependence graph as the main abstraction for reasoning about and exploiting parallelism in “regularâ€...
Keshav Pingali, Donald Nguyen, Milind Kulkarni, Ma...
130
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BMCBI
2007
136views more  BMCBI 2007»
15 years 15 days ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette