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» A Parallel Algorithm for Gene Expressing Data Biclustering
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BIBE
2008
IEEE
160views Bioinformatics» more  BIBE 2008»
15 years 7 months ago
Parallel integration of heterogeneous genome-wide data sources
— Heterogeneous genome-wide data sources capture information on various aspects of complex biological systems. For instance, transcriptome, interactome and phenome-level informat...
Derek Greene, Kenneth Bryan, Padraig Cunningham
118
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SC
2009
ACM
15 years 5 months ago
Cloud technologies for bioinformatics applications
Executing large number of independent tasks or tasks that perform minimal inter-task communication in parallel is a common requirement in many domains. In this paper, we present o...
Xiaohong Qiu, Jaliya Ekanayake, Scott Beason, Thil...
96
Voted
ICIP
2009
IEEE
16 years 1 months ago
A Bio-inspired Cnn With Re-indexing Engine For Lossless Dna Microarray Compression And Segmentation
The DNA microarray images allow to analyze the natural gene expressions. In this paper we propose an advanced method to efficiently address the imaging storage as well as the perf...
BMCBI
2010
154views more  BMCBI 2010»
14 years 10 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
91
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IV
2007
IEEE
178views Visualization» more  IV 2007»
15 years 6 months ago
Viewing the Larger Context of Genomic Data through Horizontal Integration
Genomics is an important emerging scientific field that relies on meaningful data visualization as a key step in analysis. Specifically, most investigation of gene expression micr...
Matthew A. Hibbs, Grant Wallace, Maitreya J. Dunha...