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» A Parallel Algorithm for Gene Expressing Data Biclustering
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BMCBI
2010
151views more  BMCBI 2010»
15 years 3 months ago
BABAR: an R package to simplify the normalisation of common reference design microarray-based transcriptomic datasets
Background: The development of DNA microarrays has facilitated the generation of hundreds of thousands of transcriptomic datasets. The use of a common reference microarray design ...
Mark J. Alston, John Seers, Jay C. D. Hinton, Sach...
PR
2006
116views more  PR 2006»
15 years 3 months ago
Shared farthest neighbor approach to clustering of high dimensionality, low cardinality data
Clustering algorithms are routinely used in biomedical disciplines, and are a basic tool in bioinformatics. Depending on the task at hand, there are two most popular options, the ...
Stefano Rovetta, Francesco Masulli
JCB
2002
70views more  JCB 2002»
15 years 2 months ago
Strong Feature Sets from Small Samples
For small samples, classi er design algorithms typically suffer from over tting. Given a set of features, a classi er must be designed and its error estimated. For small samples, ...
Seungchan Kim, Edward R. Dougherty, Junior Barrera...
PPOPP
1991
ACM
15 years 6 months ago
Coarse-Grain Parallel Programming in Jade
This paper presents Jade, a language which allows a programmer to easily express dynamic coarse-grain parallelism. Starting with a sequential program, a programmer augments those ...
Monica S. Lam, Martin C. Rinard
BMCBI
2006
108views more  BMCBI 2006»
15 years 3 months ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman