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» A Part-of-Speech-Based Alignment Algorithm
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COMPLIFE
2005
Springer
15 years 10 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
IPPS
2002
IEEE
15 years 9 months ago
Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments
This paper is concerned with the efficient execution of multiplesequence alignmentmethodsin a multipleclientenvironment. Multiple sequence alignment (MSA) is a computationally ex...
Ümit V. Çatalyürek, Eric Stahlber...
RECOMB
1998
Springer
15 years 8 months ago
A polyhedral approach to RNA sequence structure alignment
Ribonucleic acid (RNA) is a polymer composed of four bases denoted A, C, G, and U. It is a generally single-stranded molecule where the bases form hydrogen bonds within the same m...
Hans-Peter Lenhof, Knut Reinert, Martin Vingron
CSMR
2004
IEEE
15 years 8 months ago
Experimental Results on the Alignment of Multilingual Web Sites
Institutions and companies that are based in countries where the main language is not English typically publish Web sites that offer the same information at least in the local lan...
Filippo Ricca, Paolo Tonella, Emanuele Pianta, Chr...
GCB
2000
Springer
137views Biometrics» more  GCB 2000»
15 years 8 months ago
Detecting Sporadic Recombination in DNA Alignments with Hidden Markov Models
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
Dirk Husmeier, Frank Wright