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» A Part-of-Speech-Based Alignment Algorithm
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GECCO
2006
Springer
220views Optimization» more  GECCO 2006»
15 years 8 months ago
A comparative study of immune system based genetic algorithms in dynamic environments
Diversity and memory are two major mechanisms used in biology to keep the adaptability of organisms in the everchanging environment in nature. These mechanisms can be integrated i...
Shengxiang Yang
FPL
2008
Springer
150views Hardware» more  FPL 2008»
15 years 6 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar
ECCV
2006
Springer
16 years 6 months ago
The Alignment Between 3-D Data and Articulated Shapes with Bending Surfaces
In this paper we address the problem of aligning 3-D data with articulated shapes. This problem resides at the core of many motion tracking methods with applications in human motio...
Guillaume Dewaele, Frederic Devernay, Radu Horaud,...
BMCBI
2008
244views more  BMCBI 2008»
15 years 4 months ago
RNAalifold: improved consensus structure prediction for RNA alignments
Background: The prediction of a consensus structure for a set of related RNAs is an important first step for subsequent analyses. RNAalifold, which computes the minimum energy str...
Stephan H. F. Bernhart, Ivo L. Hofacker, Sebastian...
BMCBI
2006
78views more  BMCBI 2006»
15 years 4 months ago
Subfamily logos: visualization of sequence deviations at alignment positions with high information content
Background: Recognition of relevant sequence deviations can be valuable for elucidating functional differences between protein subfamilies. Interesting residues at highly conserve...
Eric Beitz