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» A Part-of-Speech-Based Alignment Algorithm
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BIOCOMP
2007
15 years 6 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ...
Xuehui Li, Tamer Kahveci
137
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ACL
2003
15 years 6 months ago
A Comparative Study on Reordering Constraints in Statistical Machine Translation
In statistical machine translation, the generation of a translation hypothesis is computationally expensive. If arbitrary wordreorderings are permitted, the search problem is NP-h...
Richard Zens, Hermann Ney
NAACL
2003
15 years 6 months ago
Statistical Phrase-Based Translation
We propose a new phrase-based translation model and decoding algorithm that enables us to evaluate and compare several, previously proposed phrase-based translation models. Within...
Philipp Koehn, Franz Josef Och, Daniel Marcu
139
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NIPS
2003
15 years 6 months ago
Gene Expression Clustering with Functional Mixture Models
We propose a functional mixture model for simultaneous clustering and alignment of sets of curves measured on a discrete time grid. The model is specifically tailored to gene exp...
Darya Chudova, Christopher E. Hart, Eric Mjolsness...
154
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ISMB
1998
15 years 6 months ago
Bayesian Protein Family Classifier
A Bayesian procedure for the simultaneous alignment and classification of sequences into subclasses is described. This Gibbs sampling algorithm iterates between an alignment step ...
Kunbin Qu, Lee Ann McCue, Charles E. Lawrence