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» A Part-of-Speech-Based Alignment Algorithm
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CSB
2004
IEEE
124views Bioinformatics» more  CSB 2004»
15 years 3 months ago
Multiple RNA Structure Alignment
RNA structures can be viewed as a kind of special strings with some characters bonded with each other. The question of aligning two RNA structures has been studied for a while, an...
Zhuozhi Wang, Kaizhong Zhang
BMCBI
2007
107views more  BMCBI 2007»
14 years 11 months ago
Progressive multiple sequence alignments from triplets
Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
Matthias Kruspe, Peter F. Stadler
BMCBI
2004
158views more  BMCBI 2004»
14 years 11 months ago
Improvement of alignment accuracy utilizing sequentially conserved motifs
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand,...
ICDAR
2011
IEEE
13 years 11 months ago
A New Text-Line Alignment Approach Based on Piece-Wise Painting Algorithm for Handwritten Documents
—Because of writing styles of different individuals, some of the text-lines may be curved in shape. For recognition of such text-lines, their proper alignment is necessary. In th...
Alireza Alaei, P. Nagabhushan, Umapada Pal
GCB
2006
Springer
140views Biometrics» more  GCB 2006»
15 years 3 months ago
PALMA: Perfect Alignments using Large Margin Algorithms
: Despite many years of research on how to properly align sequences in the presence of sequencing errors, alternative splicing and micro-exons, the correct alignment of mRNA sequen...
Gunnar Rätsch, Bettina Hepp, Uta Schulze, Che...