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BMCBI
2008
214views more  BMCBI 2008»
13 years 6 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
EDBT
2006
ACM
191views Database» more  EDBT 2006»
14 years 6 months ago
Parallelizing Skyline Queries for Scalable Distribution
Skyline queries help users make intelligent decisions over complex data, where different and often conflicting criteria are considered. Current skyline computation methods are rest...
Ping Wu, Caijie Zhang, Ying Feng, Ben Y. Zhao, Div...
CHES
2005
Springer
155views Cryptology» more  CHES 2005»
13 years 11 months ago
Scalable Hardware for Sparse Systems of Linear Equations, with Applications to Integer Factorization
Motivated by the goal of factoring large integers using the Number Field Sieve, several special-purpose hardware designs have been recently proposed for solving large sparse system...
Willi Geiselmann, Adi Shamir, Rainer Steinwandt, E...
IPPS
2010
IEEE
13 years 4 months ago
Optimization of linked list prefix computations on multithreaded GPUs using CUDA
We present a number of optimization techniques to compute prefix sums on linked lists and implement them on multithreaded GPUs using CUDA. Prefix computations on linked structures ...
Zheng Wei, Joseph JáJá
PARA
1995
Springer
13 years 9 months ago
A Proposal for a Set of Parallel Basic Linear Algebra Subprograms
This paper describes a proposal for a set of Parallel Basic Linear Algebra Subprograms PBLAS. The PBLAS are targeted at distributed vector-vector, matrix-vector and matrixmatrix...
Jaeyoung Choi, Jack Dongarra, Susan Ostrouchov, An...