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ISSTA
2010
ACM
15 years 3 days ago
Automatically identifying critical input regions and code in applications
Applications that process complex inputs often react in different ways to changes in different regions of the input. Small changes to forgiving regions induce correspondingly smal...
Michael Carbin, Martin C. Rinard
BMCBI
2007
147views more  BMCBI 2007»
15 years 11 hour ago
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes
Background: Computational prediction methods are currently used to identify genes in prokaryote genomes. However, identification of the correct translation initiation sites remain...
Yuko Makita, Michiel J. L. de Hoon, Antoine Danchi...
BMCBI
2008
130views more  BMCBI 2008»
15 years 10 hour ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
NAR
2008
175views more  NAR 2008»
14 years 12 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
JCDL
2009
ACM
139views Education» more  JCDL 2009»
15 years 6 months ago
Topic model methods for automatically identifying out-of-scope resources
Recent years have seen the rise of subject-themed digital libraries, such as the NSDL pathways and the Digital Library for Earth System Education (DLESE). These libraries often ne...
Steven Bethard, Soumya Ghosh, James H. Martin, Tam...