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BMCBI
2010
150views more  BMCBI 2010»
14 years 9 months ago
Automatic structure classification of small proteins using random forest
Background: Random forest, an ensemble based supervised machine learning algorithm, is used to predict the SCOP structural classification for a target structure, based on the simi...
Pooja Jain, Jonathan D. Hirst
BMCBI
2005
155views more  BMCBI 2005»
14 years 9 months ago
Mining protein function from text using term-based support vector machines
Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
ICPR
2004
IEEE
15 years 10 months ago
Relaxation Labeling Processes for Protein Secondary Structure Prediction
The prediction of protein secondary structure is a classical problem in bioinformatics, and in the past few years several machine learning techniques have been proposed to t. From...
Giacomo Colle, Marcello Pelillo
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TCBB
2010
112views more  TCBB 2010»
14 years 4 months ago
A Study of Hierarchical and Flat Classification of Proteins
Automatic classification of proteins using machine learning is an important problem that has received significant attention in the literature. One feature of this problem is that e...
Arthur Zimek, Fabian Buchwald, Eibe Frank, Stefan ...
SIGIR
2005
ACM
15 years 3 months ago
On the collective classification of email "speech acts"
We consider classification of email messages as to whether or not they contain certain “email acts”, such as a request or a commitment. We show that exploiting the sequential ...
Vitor Rocha de Carvalho, William W. Cohen