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» A Query System in a Biological Database
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ACMSE
2005
ACM
15 years 3 months ago
A Java API for global querying and updates for a system of databases
In this paper, we present the design of system of databases (SyDb). We also give the design and implementation of a Java API for global querying and updates on the SyDb. The datab...
Rajshekhar Sunderraman, Erdogan Dogdu, Praveen Mad...
VLDB
1990
ACM
74views Database» more  VLDB 1990»
15 years 1 months ago
Query Processing for Distance Metrics
In applications such as vision and molecular biology, a common problem is to find the similar objects to a given target (according to some distance measure) in a large database. T...
Jason Tsong-Li Wang, Dennis Shasha
ANSS
2006
IEEE
15 years 3 months ago
iSimBioSys: A Discrete Event Simulation Platform for 'in silico' study of biological systems
With the availability of huge databases cataloguing the various molecular “parts” of complex biological systems, researchers from multiple disciplines have focused on developi...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
BALT
2006
15 years 1 months ago
Introducing Softness into Inductive Queries on String Databases
In many application domains (e.g., WWW mining, molecular biology), large string datasets are available and yet under-exploited. The inductive database framework assumes that both s...
Ieva Mitasiunaite, Jean-François Boulicaut
BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
Querying the public databases for sequences using complex keywords contained in the feature lines
Background: High throughput technologies often require the retrieval of large data sets of sequences. Retrieval of EMBL or GenBank entries using keywords is easy using tools such ...
Olivier Croce, Michaël Lamarre, Richard Chris...