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» A Region Inference Algorithm
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ALMOB
2008
160views more  ALMOB 2008»
15 years 6 months ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
BMCBI
2006
108views more  BMCBI 2006»
15 years 6 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham
ISPD
2000
ACM
94views Hardware» more  ISPD 2000»
15 years 10 months ago
Datapath routing based on a decongestion metric
For a four-layer datapath routing environment, we present an algorithm that considers all the nets simultaneously. Routing probabilities are calculated for potential routing regio...
Suresh Raman, Sachin S. Sapatnekar, Charles J. Alp...
IPCV
2007
15 years 7 months ago
Nonconvex Regularization for Image Segmentation
Abstract - We propose a new method for image segmentation based on a variational regularization algorithm for image denoising. We modify the Rudin-Osher-Fatemi (ROF) model in [1] b...
Rick Chartrand, Valentina Staneva
CORR
2010
Springer
113views Education» more  CORR 2010»
15 years 6 months ago
Opaque sets
The problem of finding "small" sets that meet every straight-line which intersects a given convex region was initiated by Mazurkiewicz in 1916. We call such a set an opa...
Adrian Dumitrescu, János Pach