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ICALP
2001
Springer
15 years 7 months ago
Permutation Editing and Matching via Embeddings
Abstract. If the genetic maps of two species are modelled as permutations of (homologous) genes, the number of chromosomal rearrangements in the form of deletions, block moves, inv...
Graham Cormode, S. Muthukrishnan, Süleyman Ce...
124
Voted
IPPS
1996
IEEE
15 years 6 months ago
Practical Parallel Algorithms for Dynamic Data Redistribution, Median Finding, and Selection
A common statistical problem is that of nding the median element in a set of data. This paper presents a fastand portable parallel algorithm for nding the median given a set of el...
David A. Bader, Joseph JáJá
122
Voted
RECOMB
2005
Springer
16 years 2 months ago
Lower Bounds for Maximum Parsimony with Gene Order Data
Abstract. In this paper, we study lower bound techniques for branchand-bound algorithms for maximum parsimony, with a focus on gene order data. We give a simple O(n3 ) time dynamic...
Abraham Bachrach, Kevin Chen, Chris Harrelson, Rad...
123
Voted
WINE
2005
Springer
100views Economy» more  WINE 2005»
15 years 8 months ago
A Primal-Dual Algorithm for Computing Fisher Equilibrium in the Absence of Gross Substitutability Property
Abstract. We provide the first strongly polynomial time exact combinatorial algorithm to compute Fisher equilibrium for the case when utility functions do not satisfy the Gross su...
Dinesh Garg, Kamal Jain, Kunal Talwar, Vijay V. Va...
GECCO
2005
Springer
125views Optimization» more  GECCO 2005»
15 years 8 months ago
Schema disruption in tree-structured chromosomes
We study if and when the inequality dp(H) ≤ rel∆(H) holds for schemas H in chromosomes that are structured as trees. The disruption probability dp(H) is the probability that a...
William A. Greene