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» A Rule-Based Approach to Framework Evolution
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BMCBI
2010
172views more  BMCBI 2010»
14 years 9 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
FCA
2005
Springer
188views Formal Methods» more  FCA 2005»
15 years 3 months ago
Formal Concept Analysis-Based Class Hierarchy Design in Object-Oriented Software Development
The class hierarchy is an important aspect of object-oriented software development. Design and maintenance of such a hierarchy is a difficult task that is often accomplished witho...
Robert Godin, Petko Valtchev
TON
2010
157views more  TON 2010»
14 years 4 months ago
Random Access Game and Medium Access Control Design
We study the contention/interaction among wireless nodes and med -ium access control design in game theory framework. We define a general class of games, called random access game...
Lijun Chen, Steven H. Low, John C. Doyle
BMCBI
2006
87views more  BMCBI 2006»
14 years 9 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
GECCO
2005
Springer
140views Optimization» more  GECCO 2005»
15 years 3 months ago
MDGA: motif discovery using a genetic algorithm
Computationally identifying transcription factor binding sites in the promoter regions of genes is an important problem in computational biology and has been under intensive resea...
Dongsheng Che, Yinglei Song, Khaled Rasheed