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» A Sensitive Sequence Comparison Method
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101
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DASFAA
2005
IEEE
136views Database» more  DASFAA 2005»
15 years 7 months ago
Indexing DNA Sequences Using q-Grams
We have observed in recent years a growing interest in similarity search on large collections of biological sequences. Contributing to the interest, this paper presents a method fo...
Xia Cao, Shuai Cheng Li, Anthony K. H. Tung
BMCBI
2004
120views more  BMCBI 2004»
15 years 1 months ago
An approach to large scale identification of non-obvious structural similarities between proteins
Background: A new sequence independent bioinformatics approach allowing genome-wide search for proteins with similar three dimensional structures has been developed. By utilizing ...
Artem Cherkasov, Steven J. M. Jones
BMCBI
2006
118views more  BMCBI 2006»
15 years 1 months ago
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis
Background: Concerns are often raised about the accuracy of microarray technologies and the degree of cross-platform agreement, but there are yet no methods which can unambiguousl...
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diy...
NAR
2002
110views more  NAR 2002»
15 years 1 months ago
Comparative Genometrics (CG): a database dedicated to biometric comparisons of whole genomes
The ever increasing rate at which whole genome sequences are becoming accessible to the scientific community has created an urgent need for tools enabling comparison of chromosome...
Claude-Alain H. Roten, Patrick Gamba, Jean-Luc Bar...
110
Voted
BMCBI
2010
105views more  BMCBI 2010»
15 years 2 months ago
Effects of scanning sensitivity and multiple scan algorithms on microarray data quality
Background: Maximizing the utility of DNA microarray data requires optimization of data acquisition through selection of an appropriate scanner setting. To increase the amount of ...
Andrew Williams, Errol M. Thomson