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» A Sensitive Sequence Comparison Method
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BMCBI
2006
95views more  BMCBI 2006»
14 years 9 months ago
Discrete profile comparison using information bottleneck
Sequence homologs are an important source of information about proteins. Amino acid profiles, representing the position-specific mutation probabilities found in profiles, are a ri...
Sean O'Rourke, Gal Chechik, Robin Friedman, Eleaza...
MICCAI
2002
Springer
15 years 10 months ago
Improved Detection Sensitivity in Functional MRI Data Using a Brain Parcelling Technique
We present a comparison between a voxel based approach and a region based technique for detecting brain activation signals in sequences of functional Magnetic Resonance Images (fMR...
Guillaume Flandin, Ferath Kherif, Xavier Pennec, G...
BMCBI
2004
84views more  BMCBI 2004»
14 years 9 months ago
Comparison of computational methods for identifying translation initiation sites in EST data
Background: Expressed Sequence Tag (EST) sequences are generally single-strand, single-pass sequences, only 200
Afshin Nadershahi, Scott C. Fahrenkrug, Lynda B. M...
RECOMB
2004
Springer
15 years 9 months ago
Chromosomal breakpoint re-use in the inference of genome sequence rearrangement
In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
David Sankoff, Phil Trinh
STOC
2000
ACM
156views Algorithms» more  STOC 2000»
15 years 1 months ago
Near optimal multiple alignment within a band in polynomial time
Multiple sequence alignment is a fundamental problem in computational biology. Because of its notorious difficulties, aligning sequences within a constant band (c-diagonal) is a ...
Ming Li, Bin Ma, Lusheng Wang