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» A Sensitive Sequence Comparison Method
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117
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BMCBI
2007
131views more  BMCBI 2007»
15 years 2 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
COMPLIFE
2006
Springer
15 years 5 months ago
Beating the Noise: New Statistical Methods for Detecting Signals in MALDI-TOF Spectra Below Noise Level
Background: The computer-assisted detection of small molecules by mass spectrometry in biological samples provides a snapshot of thousands of peptides, protein fragments and prote...
Tim O. F. Conrad, Alexander Leichtle, Andre Hageh&...
AUSAI
2008
Springer
15 years 3 months ago
Propositionalisation of Profile Hidden Markov Models for Biological Sequence Analysis
Hidden Markov Models are a widely used generative model for analysing sequence data. A variant, Profile Hidden Markov Models are a special case used in Bioinformatics to represent,...
Stefan Mutter, Bernhard Pfahringer, Geoffrey Holme...
134
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EMNLP
2008
15 years 3 months ago
An Analysis of Active Learning Strategies for Sequence Labeling Tasks
Active learning is well-suited to many problems in natural language processing, where unlabeled data may be abundant but annotation is slow and expensive. This paper aims to shed ...
Burr Settles, Mark Craven
109
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BMCBI
2005
99views more  BMCBI 2005»
15 years 1 months ago
Super paramagnetic clustering of protein sequences
Background: Detection of sequence homologues represents a challenging task that is important for the discovery of protein families and the reliable application of automatic annota...
Igor V. Tetko, Axel Facius, Andreas Ruepp, Hans-We...