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» A Sensitive Sequence Comparison Method
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BMCBI
2006
115views more  BMCBI 2006»
15 years 2 months ago
Detecting recombination in evolving nucleotide sequences
Background: Genetic recombination can produce heterogeneous phylogenetic histories within a set of homologous genes. These recombination events can be obscured by subsequent resid...
Cheong Xin Chan, Robert G. Beiko, Mark A. Ragan
BIBE
2007
IEEE
167views Bioinformatics» more  BIBE 2007»
15 years 6 months ago
Assessing the Performance of Macromolecular Sequence Classifiers
Machine learning approaches offer some of the most cost-effective approaches to building predictive models (e.g., classifiers) in a broad range of applications in computational bio...
Cornelia Caragea, Jivko Sinapov, Vasant Honavar, D...
BMCBI
2008
112views more  BMCBI 2008»
15 years 2 months ago
A simplified approach to disulfide connectivity prediction from protein sequences
Background: Prediction of disulfide bridges from protein sequences is useful for characterizing structural and functional properties of proteins. Several methods based on differen...
Marc Vincent, Andrea Passerini, Matthieu Labb&eacu...
103
Voted
CBMS
2006
IEEE
15 years 8 months ago
Evaluation of an Online Analogical Patient Simulation Program
Medulator™, a commercial Web-based, variable response, patient simulation application, was modified to test the effect of case sequencing, explicit case comparison, and user-gen...
Gregory A. Thompson, Robert G. Morrison, Keith J. ...
102
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FCT
2005
Springer
15 years 7 months ago
Fully Incremental LCS Computation
Sequence comparison is a fundamental task in pattern matching. Its applications include file comparison, spelling correction, information retrieval, and computing (dis)similaritie...
Yusuke Ishida, Shunsuke Inenaga, Ayumi Shinohara, ...