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» A Sensitive Sequence Comparison Method
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BMCBI
2006
102views more  BMCBI 2006»
15 years 3 months ago
UVPAR: fast detection of functional shifts in duplicate genes
Background: The imprint of natural selection on gene sequences is often difficult to detect. A plethora of methods have been devised to detect genetic changes due to selective pro...
Vicente Arnau, Miguel Gallach, J. Ignasi Lucas, Ig...
BMCBI
2005
212views more  BMCBI 2005»
15 years 3 months ago
PAGE: Parametric Analysis of Gene Set Enrichment
Background: Gene set enrichment analysis (GSEA) is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes i...
Seon-Young Kim, David J. Volsky
DRR
2004
15 years 6 months ago
A nonparametric classifier for unsegmented text
Symbolic Indirect Correlation (SIC) is a new classification method for unsegmented patterns. SIC requires two levels of comparisons. First, the feature sequences from an unknown q...
George Nagy, Ashutosh Joshi, Mukkai S. Krishnamoor...
BMCBI
2006
99views more  BMCBI 2006»
15 years 3 months ago
Genetic algorithm learning as a robust approach to RNA editing site prediction
Background: RNA editing is one of several post-transcriptional modifications that may contribute to organismal complexity in the face of limited gene complement in a genome. One f...
James Thompson, Shuba Gopal
ISMB
2000
15 years 5 months ago
Integrative Analysis of Protein Interaction Data
We have developed a method for the integrative analysis of protein interaction data. It comprises clustering, visualization and data integration components. The method is generall...
Matthias Fellenberg, Kaj Albermann, Alfred Zollner...