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» A Sensitive Sequence Comparison Method
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BMCBI
2006
125views more  BMCBI 2006»
15 years 2 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
TKDE
2002
112views more  TKDE 2002»
15 years 1 months ago
Multiversion Locking Protocol with Freezing for Secure Real-Time Database Systems
Database systems for real-time applications must satisfy timing constraints associated with transactions. Typically, a timing constraint is expressed in the form of a deadline and ...
Chanjung Park, Seog Park, Sang Hyuk Son
BMCBI
2007
165views more  BMCBI 2007»
15 years 1 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf
COCOON
2005
Springer
15 years 7 months ago
Quartet-Based Phylogeny Reconstruction from Gene Orders
Abstract. Phylogenetic reconstruction from gene-rearrangement data is attracting increasing attention from biologists and computer scientists. Methods used in reconstruction includ...
Tao Liu, Jijun Tang, Bernard M. E. Moret
BMCBI
2007
94views more  BMCBI 2007»
15 years 1 months ago
Model based analysis of real-time PCR data from DNA binding dye protocols
Background: Reverse transcription followed by real-time PCR is widely used for quantification of specific mRNA, and with the use of double-stranded DNA binding dyes it is becoming...
Mariano J. Alvarez, Guillermo J. Vila-Ortiz, Maria...