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CSL
2010
Springer
14 years 10 months ago
Embedding Deduction Modulo into a Prover
Deduction modulo consists in presenting a theory through rewrite rules to support automatic and interactive proof search. It induces proof search methods based on narrowing, such a...
Guillaume Burel
CP
2003
Springer
15 years 2 months ago
A SAT-Based Approach to Multiple Sequence Alignment
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
ICCAD
1997
IEEE
108views Hardware» more  ICCAD 1997»
15 years 1 months ago
Negative thinking by incremental problem solving: application to unate covering
We introduce a new technique to solve exactly a discrete optimization problem, based on the paradigm of “negative” thinking. The motivation is that when searching the space of...
Evguenii I. Goldberg, Luca P. Carloni, Tiziano Vil...
BMCBI
2010
164views more  BMCBI 2010»
14 years 9 months ago
Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
Background: The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability i...
Chad Laing, Cody Buchanan, Eduardo N. Taboada, Yon...
RECOMB
2007
Springer
15 years 10 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss