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» A Theory of Expressiveness in Mechanisms
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BMCBI
2005
169views more  BMCBI 2005»
14 years 9 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
JBCB
2007
161views more  JBCB 2007»
14 years 9 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
BMCBI
2005
122views more  BMCBI 2005»
14 years 9 months ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
TMC
2008
112views more  TMC 2008»
14 years 9 months ago
Throughput Analysis and Measurements in IEEE 802.11 WLANs with TCP and UDP Traffic Flows
There is a vast literature on the throughput analysis of the IEEE 802.11 media access control (MAC) protocol. However, very little has been done on investigating the interplay betw...
Raffaele Bruno, Marco Conti, Enrico Gregori
TMC
2008
192views more  TMC 2008»
14 years 9 months ago
A Bidding Algorithm for Optimized Utility-Based Resource Allocation in Ad Hoc Networks
Abstract-- This article proposes a scheme for bandwidth allocation in wireless ad hoc networks. The quality of service (QoS) levels for each end-to-end flow are expressed using a r...
Calin Curescu, Simin Nadjm-Tehrani