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» A Time Series Analysis of Microarray Data
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BMCBI
2010
150views more  BMCBI 2010»
14 years 7 months ago
Kernel based methods for accelerated failure time model with ultra-high dimensional data
Background: Most genomic data have ultra-high dimensions with more than 10,000 genes (probes). Regularization methods with L1 and Lp penalty have been extensively studied in survi...
Zhenqiu Liu, Dechang Chen, Ming Tan, Feng Jiang, R...
ANOR
2010
135views more  ANOR 2010»
14 years 9 months ago
A framework of irregularity enlightenment for data pre-processing in data mining
Abstract Irregularities are widespread in large databases and often lead to erroneous conclusions with respect to data mining and statistical analysis. For example, considerable bi...
Siu-Tong Au, Rong Duan, Siamak G. Hesar, Wei Jiang
87
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BMCBI
2007
152views more  BMCBI 2007»
14 years 9 months ago
Difference-based clustering of short time-course microarray data with replicates
Background: There are some limitations associated with conventional clustering methods for short time-course gene expression data. The current algorithms require prior domain know...
Jihoon Kim, Ju Han Kim
BMCBI
2008
88views more  BMCBI 2008»
14 years 9 months ago
Microarray-based gene set analysis: a comparison of current methods
Background: The analysis of gene sets has become a popular topic in recent times, with researchers attempting to improve the interpretability and reproducibility of their microarr...
Sarah Song, Michael A. Black
90
Voted
CSB
2003
IEEE
123views Bioinformatics» more  CSB 2003»
15 years 3 months ago
Fourier Harmonic Approach for Visualizing Temporal Patterns of Gene Expression Data
DNA microarray technology provides a broad snapshot of the state of the cell by measuring the expression levels of thousands of genes simultaneously. Visualization techniques can ...
Li Zhang, Aidong Zhang, Murali Ramanathan