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» A Time Series Analysis of Microarray Data
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BMCBI
2007
133views more  BMCBI 2007»
14 years 9 months ago
An efficient pseudomedian filter for tiling microrrays
Background: Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elu...
Thomas E. Royce, Nicholas Carriero, Mark B. Gerste...
BMCBI
2010
172views more  BMCBI 2010»
14 years 9 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
BMCBI
2008
129views more  BMCBI 2008»
14 years 9 months ago
Motif-directed network component analysis for regulatory network inference
Background: Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data a...
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wan...
ICCCN
2008
IEEE
15 years 4 months ago
Instrumentation and Analysis of MPI Queue Times on the SeaStar High-Performance Network
—Understanding the communication behavior and network resource usage of parallel applications is critical to achieving high performance and scalability on systems with tens of th...
Ron Brightwell, Kevin T. Pedretti, Kurt B. Ferreir...
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IPMI
2003
Springer
15 years 10 months ago
Analysis of Event-Related fMRI Data Using Best Clustering Bases
We explore a new paradigm for the analysis of event-related functional magnetic resonance images (fMRI) of brain activity. We regard the fMRI data as a very large set of time serie...
François G. Meyer, Jatuporn Chinrungrueng