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BMCBI
2007
169views more  BMCBI 2007»
15 years 4 months ago
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
Background: In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in ...
Ibtissem Grissa, Gilles Vergnaud, Christine Pource...
BMCBI
2004
133views more  BMCBI 2004»
15 years 4 months ago
Esub8: A novel tool to predict protein subcellular localizations in eukaryotic organisms
Background: Subcellular localization of a new protein sequence is very important and fruitful for understanding its function. As the number of new genomes has dramatically increas...
Qinghua Cui, Tianzi Jiang, Bing Liu, Songde Ma
OOPSLA
2004
Springer
15 years 10 months ago
Chianti: a tool for change impact analysis of java programs
This paper reports on the design and implementation of Chianti, a change impact analysis tool for Java that is implemented in the context of the Eclipse environment. Chianti analy...
Xiaoxia Ren, Fenil Shah, Frank Tip, Barbara G. Ryd...
BMCBI
2008
102views more  BMCBI 2008»
15 years 4 months ago
mtDNAmanager: a Web-based tool for the management and quality analysis of mitochondrial DNA control-region sequences
Background: For the past few years, scientific controversy has surrounded the large number of errors in forensic and literature mitochondrial DNA (mtDNA) data. However, recent res...
Hwan Young Lee, Injee Song, Eunho Ha, Sung-Bae Cho...
BMCBI
2007
93views more  BMCBI 2007»
15 years 4 months ago
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Background: Predicting a protein’s structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing ne...
Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, W...