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» A Toolbox of Level Set Methods
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131
Voted
BMCBI
2008
114views more  BMCBI 2008»
15 years 3 months ago
Combining classifiers for improved classification of proteins from sequence or structure
Background: Predicting a protein's structural or functional class from its amino acid sequence or structure is a fundamental problem in computational biology. Recently, there...
Iain Melvin, Jason Weston, Christina S. Leslie, Wi...
148
Voted
BMCBI
2006
170views more  BMCBI 2006»
15 years 3 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...
CVPR
2008
IEEE
15 years 3 months ago
Tracking distributions with an overlap prior
Recent studies have shown that embedding similarity/dissimilarity measures between distributions in the variational level set framework can lead to effective object segmentation/t...
Ismail Ben Ayed, Shuo Li, Ian G. Ross
RECOMB
2005
Springer
16 years 3 months ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston
TCBB
2011
14 years 10 months ago
Learning Genetic Regulatory Network Connectivity from Time Series Data
Recent experimental advances facilitate the collection of time series data that indicate which genes in a cell are expressed. This paper proposes an efficient method to generate th...
Nathan A. Barker, Chris J. Myers, Hiroyuki Kuwahar...