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» A Toolbox of Level Set Methods
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149
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ALMOB
2008
160views more  ALMOB 2008»
15 years 3 months ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
127
Voted
BMCBI
2008
99views more  BMCBI 2008»
15 years 3 months ago
Binning sequences using very sparse labels within a metagenome
Background: In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most of the cu...
Chon-Kit Kenneth Chan, Arthur L. Hsu, Saman K. Hal...
129
Voted
CICLING
2010
Springer
15 years 10 months ago
An Experimental Study on Unsupervised Graph-based Word Sense Disambiguation
Recent research works on unsupervised word sense disambiguation report an increase in performance, which reduces their handicap from the respective supervised approaches for the sa...
George Tsatsaronis, Iraklis Varlamis, Kjetil N&osl...
133
Voted
BMCBI
2010
130views more  BMCBI 2010»
15 years 3 months ago
A statistical approach to finding overlooked genetic associations
Background: Complexity and noise in expression quantitative trait loci (eQTL) studies make it difficult to distinguish potential regulatory relationships among the many interactio...
Andrew K. Rider, Geoffrey Siwo, Nitesh V. Chawla, ...
139
Voted
BMCBI
2007
147views more  BMCBI 2007»
15 years 3 months ago
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes
Background: Computational prediction methods are currently used to identify genes in prokaryote genomes. However, identification of the correct translation initiation sites remain...
Yuko Makita, Michiel J. L. de Hoon, Antoine Danchi...