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IPPS
2005
IEEE
13 years 12 months ago
Power and Energy Profiling of Scientific Applications on Distributed Systems
Power consumption is a troublesome design constraint for emergent systems such as IBM’s BlueGene /L. If current trends continue, future petaflop systems will require 100 megawat...
Xizhou Feng, Rong Ge, Kirk W. Cameron
WEA
2005
Springer
176views Algorithms» more  WEA 2005»
13 years 11 months ago
High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology
Abstract. Many large-scale optimization problems rely on graph theoretic solutions; yet high-performance computing has traditionally focused on regular applications with high degre...
David A. Bader
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 6 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
BMCBI
2011
13 years 1 months ago
A Computational Framework for Proteome-Wide Pursuit and Prediction of Metalloproteins using ICP-MS and MS/MS Data
Background: Metal-containing proteins comprise a diverse and sizable category within the proteomes of organisms, ranging from proteins that use metals to catalyze reactions to pro...
W. Andrew Lancaster, Jeremy L. Praissman, Farris L...