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» A Transcriptional Approach to Gene Clustering
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ICDM
2006
IEEE
129views Data Mining» more  ICDM 2006»
15 years 4 months ago
Consensus Clustering for Detection of Overlapping Clusters in Microarray Data
Most clustering algorithms are partitional in nature, assigning each data point to exactly one cluster. However, several real world datasets have inherently overlapping clusters i...
Meghana Deodhar, Joydeep Ghosh
PR
2006
116views more  PR 2006»
14 years 9 months ago
Shared farthest neighbor approach to clustering of high dimensionality, low cardinality data
Clustering algorithms are routinely used in biomedical disciplines, and are a basic tool in bioinformatics. Depending on the task at hand, there are two most popular options, the ...
Stefano Rovetta, Francesco Masulli
BMCBI
2006
85views more  BMCBI 2006»
14 years 10 months ago
Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shoc
Background: Understanding the relationship between gene expression changes, enzyme activity shifts, and the corresponding physiological adaptive response of organisms to environme...
Ester Vilaprinyó, Rui Alves, Albert Sorriba...
WABI
2004
Springer
132views Bioinformatics» more  WABI 2004»
15 years 3 months ago
Joint Analysis of DNA Copy Numbers and Gene Expression Levels
Abstract. Genomic instabilities, amplifications, deletions and translocations are often observed in tumor cells. In the process of cancer pathogenesis cells acquire multiple genom...
Doron Lipson, Amir Ben-Dor, Elinor Dehan, Zohar Ya...
CSB
2003
IEEE
124views Bioinformatics» more  CSB 2003»
15 years 3 months ago
SMASHing regulatory sites in DNA by human
Regulatory sequence elements provide important clues to understanding and predicting gene expression. Although the binding sites for hundreds of transcription factors are known, t...
Mihaela Zavolan, Nicholas D. Socci, Nikolaus Rajew...