Sciweavers

514 search results - page 89 / 103
» A Transcriptional Approach to Gene Clustering
Sort
View
CLUSTER
2005
IEEE
15 years 3 months ago
Fast Query Processing by Distributing an Index over CPU Caches
Data intensive applications on clusters often require requests quickly be sent to the node managing the desired data. In many applications, one must look through a sorted tree str...
Xiaoqin Ma, Gene Cooperman
BMCBI
2010
136views more  BMCBI 2010»
14 years 10 months ago
Bias correction and Bayesian analysis of aggregate counts in SAGE libraries
Background: Tag-based techniques, such as SAGE, are commonly used to sample the mRNA pool of an organism's transcriptome. Incomplete digestion during the tag formation proces...
Russell L. Zaretzki, Michael A. Gilchrist, William...
BMCBI
2005
201views more  BMCBI 2005»
14 years 9 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
BMCBI
2007
123views more  BMCBI 2007»
14 years 10 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...
CEC
2007
IEEE
15 years 4 months ago
A co-evolutionary framework for regulatory motif discovery
Abstract— In previous work, we have shown how an evolutionary algorithm with a clustered population can be used to concurrently discover multiple regulatory motifs present within...
Michael A. Lones, Andy M. Tyrrell