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BMCBI
2002
126views more  BMCBI 2002»
15 years 4 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
RV
2010
Springer
177views Hardware» more  RV 2010»
15 years 2 months ago
Runtime Instrumentation for Precise Flow-Sensitive Type Analysis
We describe a combination of runtime information and static analysis for checking properties of complex and configurable systems. The basic idea of our approach is to 1) let the p...
Etienne Kneuss, Philippe Suter, Viktor Kuncak
BMCBI
2007
129views more  BMCBI 2007»
15 years 4 months ago
Integrated network reconstruction, visualization and analysis using YANAsquare
Background: Modeling of metabolic networks includes tasks such as network assembly, network overview, calculation of metabolic fluxes and testing the robustness of the network. Re...
Roland Schwarz, Chunguang Liang, Christoph Kaleta,...
RE
2006
Springer
15 years 4 months ago
Interaction Analysis in Aspect-Oriented Models
Aspect-oriented concepts are currently introduced in all phases of the software development life cycle. However, the complexity of interactions among different aspects and between...
Katharina Mehner, Mattia Monga, Gabriele Taentzer
134
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ACSAC
2007
IEEE
15 years 10 months ago
MetaAware: Identifying Metamorphic Malware
Detection of malicious software (malware) by the use of static signatures is often criticized for being overly simplistic. Available methods of obfuscating code (so-called metamor...
Qinghua Zhang, Douglas S. Reeves