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» A case for an SC-preserving compiler
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81
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BMCBI
2008
87views more  BMCBI 2008»
14 years 11 months ago
Identification of deleterious non-synonymous single nucleotide polymorphisms using sequence-derived information
Background: As the number of non-synonymous single nucleotide polymorphisms (nsSNPs), also known as single amino acid polymorphisms (SAPs), increases rapidly, computational method...
Jing Hu, Changhui Yan
103
Voted
BMCBI
2008
135views more  BMCBI 2008»
14 years 11 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
BMCBI
2007
102views more  BMCBI 2007»
14 years 11 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
99
Voted
BMCBI
2007
141views more  BMCBI 2007»
14 years 11 months ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
JAPLL
2008
91views more  JAPLL 2008»
14 years 11 months ago
Undoing the effects of action sequences
In this paper, we study the following basic problem: After having executed a sequence of actions, find a sequence of actions that brings the agent back to the state just before th...
Thomas Eiter, Esra Erdem, Wolfgang Faber