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» A cluster validity framework for genome expression data
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120
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ICDM
2005
IEEE
151views Data Mining» more  ICDM 2005»
15 years 7 months ago
A Framework for Semi-Supervised Learning Based on Subjective and Objective Clustering Criteria
In this paper, we propose a semi-supervised framework for learning a weighted Euclidean subspace, where the best clustering can be achieved. Our approach capitalizes on user-const...
Maria Halkidi, Dimitrios Gunopulos, Nitin Kumar, M...
115
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CINQ
2004
Springer
116views Database» more  CINQ 2004»
15 years 5 months ago
Contribution to Gene Expression Data Analysis by Means of Set Pattern Mining
Abstract. One of the exciting scientific challenges in functional genomics concerns the discovery of biologically relevant patterns from gene expression data. For instance, it is e...
Ruggero G. Pensa, Jérémy Besson, C&e...
122
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BMCBI
2006
153views more  BMCBI 2006»
15 years 1 months ago
Cancer diagnosis marker extraction for soft tissue sarcomas based on gene expression profiling data by using projective adaptive
Background: Recent advances in genome technologies have provided an excellent opportunity to determine the complete biological characteristics of neoplastic tissues, resulting in ...
Hiro Takahashi, Takeshi Nemoto, Teruhiko Yoshida, ...
136
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KDD
2006
ACM
156views Data Mining» more  KDD 2006»
16 years 2 months ago
Discovering significant OPSM subspace clusters in massive gene expression data
Order-preserving submatrixes (OPSMs) have been accepted as a biologically meaningful subspace cluster model, capturing the general tendency of gene expressions across a subset of ...
Byron J. Gao, Obi L. Griffith, Martin Ester, Steve...
BMCBI
2006
122views more  BMCBI 2006»
15 years 1 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen