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» A cluster validity framework for genome expression data
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BMCBI
2007
182views more  BMCBI 2007»
15 years 1 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
ADVIS
2006
Springer
15 years 8 months ago
Validation of XML Documents: From UML Models to XML Schemas and XSLT Stylesheets
The widespread use of XML brings out the need of ensuring the validity of XML data. The use of languages such as XML Schema makes easier the process of verification of XML documen...
Eladio Domínguez, Jorge Lloret, Angel Luis ...
BMCBI
2006
136views more  BMCBI 2006»
15 years 1 months ago
Metric for Measuring the Effectiveness of Clustering of DNA Microarray Expression
Background: The recent advancement of microarray technology with lower noise and better affordability makes it possible to determine expression of several thousand genes simultane...
Raja Loganantharaj, Satish Cheepala, John Clifford
BMCBI
2008
114views more  BMCBI 2008»
15 years 2 months ago
Partial mixture model for tight clustering of gene expression time-course
Background: Tight clustering arose recently from a desire to obtain tighter and potentially more informative clusters in gene expression studies. Scattered genes with relatively l...
Yinyin Yuan, Chang-Tsun Li, Roland Wilson
BMCBI
2007
128views more  BMCBI 2007»
15 years 1 months ago
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements
Background: Arabidopsis thaliana is the model species of current plant genomic research with a genome size of 125 Mb and approximately 28,000 genes. The function of half of these ...
Hui Lan, Rachel Carson, Nicholas J. Provart, Antho...