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» A comparative study of S MAR prediction tools
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BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Background: Despite a remarkable success in the computational prediction of genes in Bacteria and Archaea, a lack of comprehensive understanding of prokaryotic gene structures pre...
Huaiqiu Zhu, Gang-Qing Hu, Yi-Fan Yang, Jin Wang, ...
COMPSAC
2005
IEEE
15 years 3 months ago
An Empirical Performance Study for Validating a Performance Analysis Approach: PSIM
Performance analysis gains more attention in recent years by researchers who focus their study on the early software development stages to mitigate the risk of redesign as problem...
Jinchun Xia, Yujia Ge, Carl K. Chang
BMCBI
2007
93views more  BMCBI 2007»
14 years 9 months ago
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Background: Predicting a protein’s structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing ne...
Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, W...
RECONFIG
2009
IEEE
182views VLSI» more  RECONFIG 2009»
15 years 4 months ago
Scalability Studies of the BLASTn Scan and Ungapped Extension Functions
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
Siddhartha Datta, Ron Sass
INFOCOM
2005
IEEE
15 years 3 months ago
A study of analyzing network traffic as images in real-time
—This paper presents NetViewer, a network measurement approach that can simultaneously detect, identify and visualize attacks and anomalous traffic in real-time by passively moni...
Seong Soo Kim, A. L. Narasimha Reddy